5ERX
Crystal Structure of APO MenD from M. tuberculosis - I222
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 110 |
Detector technology | IMAGE PLATE |
Collection date | 2012-11-09 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.54 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 100.059, 105.502, 120.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.661 - 1.729 |
R-factor | 0.2303 |
Rwork | 0.229 |
R-free | 0.25920 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.671 |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.661 | 19.660 | 1.760 |
High resolution limit [Å] | 1.729 | 8.980 | 1.730 |
Rmerge | 0.048 | 0.011 | 0.724 |
Rpim | 0.023 | 0.006 | 0.385 |
Total number of observations | 318157 | 2197 | 11298 |
Number of reflections | 62875 | ||
<I/σ(I)> | 22.6 | 110.9 | 2.2 |
Completeness [%] | 94.7 | 90.1 | 77.7 |
Redundancy | 5.1 | 4.6 | 4.1 |
CC(1/2) | 1.000 | 1.000 | 0.348 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 277 | Crystals grew in the fridge in the purification buffer. |