Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ERX

Crystal Structure of APO MenD from M. tuberculosis - I222

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date2012-11-09
DetectorMAR scanner 345 mm plate
Wavelength(s)1.54
Spacegroup nameI 2 2 2
Unit cell lengths100.059, 105.502, 120.190
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.661 - 1.729
R-factor0.2303
Rwork0.229
R-free0.25920
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.671
Data scaling softwareAimless (0.1.27)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.66119.6601.760
High resolution limit [Å]1.7298.9801.730
Rmerge0.0480.0110.724
Rpim0.0230.0060.385
Total number of observations318157219711298
Number of reflections62875
<I/σ(I)>22.6110.92.2
Completeness [%]94.790.177.7
Redundancy5.14.64.1
CC(1/2)1.0001.0000.348
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE277Crystals grew in the fridge in the purification buffer.

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon