5EKE
Structure of the polyisoprenyl-phosphate glycosyltransferase GtrB (F215A mutant)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X4C |
| Synchrotron site | NSLS |
| Beamline | X4C |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-05-31 |
| Detector | MAR CCD 165 mm |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 154.135, 142.243, 102.010 |
| Unit cell angles | 90.00, 97.16, 90.00 |
Refinement procedure
| Resolution | 34.384 - 3.001 |
| R-factor | 0.25 |
| Rwork | 0.249 |
| R-free | 0.27650 |
| Structure solution method | SAD |
| RMSD bond length | 0.009 |
| RMSD bond angle | 0.531 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless (0.5.14) |
| Refinement software | PHENIX (dev_2165) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 34.384 | 34.380 | 3.110 |
| High resolution limit [Å] | 3.000 | 11.230 | 3.000 |
| Rmerge | 0.045 | 0.026 | 1.263 |
| Rpim | 0.025 | 0.015 | 0.696 |
| Total number of observations | 182807 | 3256 | 18832 |
| Number of reflections | 43376 | ||
| <I/σ(I)> | 19.1 | 66.2 | 1.1 |
| Completeness [%] | 99.4 | 95.4 | 97.8 |
| Redundancy | 4.2 | 3.9 | 4.2 |
| CC(1/2) | 0.999 | 0.997 | 0.693 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 9 | 295 | 600 nL protein + 300 nL of reservoir composed as follows: containing 16-18% PEG600 (v/v), 0.12 M Tris/HCl, pH 9.0, 0.1 M NaCl and 1 mM TCEP) under 1 uL of silicone oil, in 96-well Axygen sitting-drop plates. Crystals typically appeared after 1-2 days and grew to a final size of approximately 150 um in each dimension |






