Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5EIR

Co-crystal structure of eIF4E with nucleotide mimetic inhibitor.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2011-05-15
DetectorDECTRIS PILATUS 300K
Wavelength(s)0.9173
Spacegroup nameP 21 2 21
Unit cell lengths38.250, 52.120, 123.670
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.029 - 2.690
R-factor0.2489
Rwork0.248
R-free0.27230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2V8Y chain A
RMSD bond length0.009
RMSD bond angle1.245
Data reduction softwareiMOSFLM
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]123.67048.0292.840
High resolution limit [Å]2.6908.5102.690
Rmerge0.0420.359
Rmeas0.193
Rpim0.1060.0290.235
Total number of observations197907392431
Number of reflections6814
<I/σ(I)>5.59.13
Completeness [%]93.897.285.8
Redundancy2.92.72.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529121-31% PEG 8000, 1???3% (NH4)2SO4, 100 mM HEPES, pH 7.5, 1 round of seeding. Crystals replaced in to above conditions without (NH4)2SO4 prior to freezing.

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon