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5E9R

X-ray structure of the complex between lysozyme and the compound fac, cis-[RuII(CO)3Cl2(N3-MBI), MBI=N-methyl-benzimidazole

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2014-06-26
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameP 43 21 2
Unit cell lengths78.500, 78.500, 36.309
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.500 - 2.250
R-factor0.15626
Rwork0.152
R-free0.23734
RMSD bond length0.014
RMSD bond angle2.781
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.5002.290
High resolution limit [Å]2.2502.250
Rmerge0.0850.436
Number of reflections5740
<I/σ(I)>12.95
Completeness [%]99.4100
Redundancy6.26.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298Hen egg white lysozyme was incubated for 2 h in the presence of Ru-MBI in 1:10 protein to metal compound ratio. The adduct was then crystallized by using the hanging drop vapour diffusion method. Drops of 1 microliter were prepared at room temperature mixing 0.5 microliter of adduct at concentration 15 mg/mL with an equal amount of a reservoir constituted by 1.1 M NaCl, 0.1 M acetate buffer, pH 4.0. Crystals of the adduct grow within 24-48 hours.

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