5E7I
Crystal structure of the active catalytic core of the human DEAD-box protein DDX3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-02-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.115869 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 92.710, 105.380, 94.610 |
Unit cell angles | 90.00, 114.54, 90.00 |
Refinement procedure
Resolution | 86.060 - 2.223 |
R-factor | 0.2274 |
Rwork | 0.226 |
R-free | 0.25910 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.816 |
Data reduction software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 86.060 | 2.280 | |
High resolution limit [Å] | 2.220 | 9.940 | 2.220 |
Rmerge | 0.161 | 0.029 | 1.361 |
Rmeas | 0.187 | 0.034 | 1.673 |
Total number of observations | 311833 | ||
Number of reflections | 79724 | 955 | 4674 |
<I/σ(I)> | 8.14 | 35.21 | 0.92 |
Completeness [%] | 97.8 | 98.3 | 77.7 |
Redundancy | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 291 | PEG 3350, sodium citrate |