5E30
Crystal structure of H5 hemagglutinin Q226L mutant from the influenza virus A/duck/Egypt/10185SS/2010 (H5N1) with LSTc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-15 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.03314 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.901, 228.524, 70.682 |
Unit cell angles | 90.00, 114.29, 90.00 |
Refinement procedure
Resolution | 49.190 - 2.700 |
R-factor | 0.2039 |
Rwork | 0.202 |
R-free | 0.24890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5e2y |
RMSD bond length | 0.010 |
RMSD bond angle | 1.274 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.760 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.670 | |
Number of reflections | 52960 | |
<I/σ(I)> | 15.7 | 1.6 |
Completeness [%] | 94.9 | 91.5 |
Redundancy | 2.6 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.085 M Tris, pH 8.5, 10% (v/v) g;ycerol, 0.17% (w/v) sodium acetate, 21% (w/v) PEG4000 |