5E1R
Crystal structure of pecan (carya illinoinensis) vicilin, a new food allergen
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2013-11-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.691, 151.610, 342.782 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.598 - 2.651 |
R-factor | 0.2193 |
Rwork | 0.218 |
R-free | 0.26190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.795 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.700 |
High resolution limit [Å] | 2.650 | 7.190 | 2.650 |
Rmerge | 0.200 | 0.150 | 0.495 |
Total number of observations | 422187 | ||
Number of reflections | 61694 | ||
<I/σ(I)> | 9.3 | ||
Completeness [%] | 92.7 | 100 | 58.5 |
Redundancy | 6.8 | 13.1 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.2 M magnesium acetate tetrahydrate, 0.1M Sodium cacodylat trihydrate 30%(v/v) MPD |