5E1Q
Mutant (D415G) GH97 alpha-galactosidase in complex with Gal-Lac
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.620, 100.624, 237.079 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.441 - 1.943 |
R-factor | 0.186 |
Rwork | 0.185 |
R-free | 0.22250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3a24 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.079 |
Refinement software | PHENIX (1.9_1690) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.100 | 2.060 | |
High resolution limit [Å] | 1.940 | 5.790 | 1.940 |
Rmerge | 0.083 | 0.021 | 0.990 |
Rmeas | 0.089 | 0.023 | 1.076 |
Total number of observations | 780735 | ||
Number of reflections | 106969 | 4383 | 16428 |
<I/σ(I)> | 18.4 | 64.74 | 2.31 |
Completeness [%] | 99.2 | 99.4 | 95.5 |
Redundancy | 7.3 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 288 | 12% PEG 6000, 0.1 M MES-NaOH (pH 6.2), 3.9 mM beta-lactosyl alpha-d-galactopyranoside |