5DZF
Crystal Structure of the catalytic nucleophile mutant of VvEG16 in complex with a mixed-linkage glucan octasaccharide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-12-11 |
| Detector | RAYONIX MX300HE |
| Wavelength(s) | 0.8266 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 74.330, 74.330, 149.280 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 42.974 - 1.650 |
| R-factor | 0.1571 |
| Rwork | 0.155 |
| R-free | 0.20050 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1umz |
| Data scaling software | XDS (January 10, 2014) |
| Phasing software | PHASER (2.5.5) |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 42.974 | 1.590 | |
| High resolution limit [Å] | 1.550 | 6.930 | 1.550 |
| Rmerge | 0.205 | 0.038 | 3.250 |
| Rmeas | 0.214 | 0.039 | 3.667 |
| Total number of observations | 738087 | ||
| Number of reflections | 60997 | 809 | 4159 |
| <I/σ(I)> | 10.85 | 52.35 | 0.41 |
| Completeness [%] | 99.2 | 99.3 | 93 |
| Redundancy | 12.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | 5 mM DTT, 5 mM G3GGG3GGG, 0.5 mM GG3GGG3GGG, 1 mM EDTA, 0.1 M HEPES, 1.6 M (NH4)2SO4 |






