Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DY7

Crystal structure of the human BRPF1 bromodomain in complex with SEED4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-07-05
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.99987
Spacegroup nameP 32 2 1
Unit cell lengths60.667, 60.667, 62.382
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.186 - 1.690
R-factor0.181
Rwork0.180
R-free0.20420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4lc2
RMSD bond length0.007
RMSD bond angle0.773
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.1901.780
High resolution limit [Å]1.6901.690
Rmerge0.0600.440
Number of reflections15153
<I/σ(I)>18.74.5
Completeness [%]99.295.5
Redundancy9.59.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52770.1M Sodium Acetate, pH5.5, 0.15 M Sodium Nitrate, 20% PEG3350

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon