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5DVC

Human PPARgamma ligand binding dmain complexed with SB1453 in a covalent bonded form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2015-03-31
DetectorADSC QUANTUM 270
Wavelength(s)0.97935
Spacegroup nameP 21 21 2
Unit cell lengths54.858, 130.281, 52.249
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.300
R-factor0.19867
Rwork0.196
R-free0.24100
RMSD bond length0.010
RMSD bond angle1.498
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.340
High resolution limit [Å]2.3002.300
Number of reflections17551
<I/σ(I)>36.945.2
Completeness [%]99.7100
Redundancy5.85.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72972.2 M sodium malonate pH 7.0

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PDB entries from 2025-06-11

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