5DR5
Crystal structure of the sclerostin-neutralizing Fab AbD09097
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-06-13 |
Detector | RIGAKU RAXIS HTC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.193, 78.495, 59.196 |
Unit cell angles | 90.00, 95.71, 90.00 |
Refinement procedure
Resolution | 20.770 - 1.850 |
R-factor | 0.1913 |
Rwork | 0.188 |
R-free | 0.24420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nh7 |
RMSD bond length | 0.018 |
RMSD bond angle | 2.006 |
Data reduction software | CrystalClear (9.2SSI) |
Data scaling software | CrystalClear (9.2SSI) |
Phasing software | PHASER (2.5.5) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.770 | 20.770 | 1.920 |
High resolution limit [Å] | 1.850 | 3.980 | 1.850 |
Rmerge | 0.068 | 0.034 | 0.300 |
Total number of observations | 126958 | 13809 | 8261 |
Number of reflections | 34389 | ||
<I/σ(I)> | 10.5 | 28.1 | 3.7 |
Completeness [%] | 97.9 | 99.7 | 80.1 |
Redundancy | 3.66 | 3.81 | 2.94 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 294 | 20% (w/v) PEG3350, 0.1M HEPES pH 7.5, 10mM zinc chloride |