Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5DG9

CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dGMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N6-ETHENODEOXYADENOSINE LESION

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2013-10-03
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 61
Unit cell lengths98.929, 98.929, 81.712
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.315 - 2.150
R-factor0.1727
Rwork0.170
R-free0.22220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4o3n
RMSD bond length0.009
RMSD bond angle1.164
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.190
High resolution limit [Å]2.1502.150
Rmerge0.1360.996
Number of reflections24805
<I/σ(I)>151.69
Completeness [%]100.0100
Redundancy7.67.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52910.1 M MES pH 5.5, 5mM magnesium chloride, 21% PEG 2000 MME

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon