5DF1
Iridoid synthase from Catharanthus roseus - ternary complex with NADP+ and geranic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 91.940, 95.470, 172.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 66.220 - 1.750 |
R-factor | 0.1882 |
Rwork | 0.187 |
R-free | 0.21530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dcu |
RMSD bond length | 0.010 |
RMSD bond angle | 1.371 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.12) |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 66.220 | 66.220 | 1.800 |
High resolution limit [Å] | 1.750 | 7.830 | 1.750 |
Rmerge | 0.115 | 0.059 | 1.681 |
Rpim | 0.050 | 0.027 | 0.702 |
Total number of observations | 492160 | 5530 | 36500 |
Number of reflections | 76022 | ||
<I/σ(I)> | 9.7 | 31 | 1.2 |
Completeness [%] | 99.6 | 99.8 | 98.1 |
Redundancy | 6.5 | 5.8 | 6.6 |
CC(1/2) | 0.995 | 0.995 | 0.543 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | NULL |