5DAK
Crystal Structure of human Glutathione Transferase Pi complexed with a metalloid in the absence of Glutathione
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-23 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.96 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 74.629, 95.509, 68.247 |
Unit cell angles | 90.00, 98.26, 90.00 |
Refinement procedure
Resolution | 46.902 - 2.110 |
R-factor | 0.1594 |
Rwork | 0.157 |
R-free | 0.20370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gss |
RMSD bond length | 0.012 |
RMSD bond angle | 1.421 |
Data scaling software | Aimless (0.5.4) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.750 | 47.750 | 2.180 |
High resolution limit [Å] | 2.110 | 8.970 | 2.110 |
Rmerge | 0.130 | 0.066 | 0.497 |
Rpim | 0.039 | 0.020 | 0.224 |
Total number of observations | 297531 | 4145 | 3499 |
Number of reflections | 50403 | ||
<I/σ(I)> | 11 | 19.9 | 2.5 |
Completeness [%] | 94.5 | 99.4 | 33.5 |
Redundancy | 11.6 | 11 | 4.7 |
CC(1/2) | 0.996 | 0.998 | 0.679 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100MM MES, PH 6.0, 28% (W/V) PEG 8000, 20MM CACL2 10MM DTT. Soaked in 2mM PAO dissolved in DMSO |