5D4U
SAM-bound HcgC from Methanocaldococcus jannaschii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-12-01 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.290, 70.520, 91.230 |
Unit cell angles | 90.00, 105.21, 90.00 |
Refinement procedure
Resolution | 42.798 - 2.000 |
R-factor | 0.1997 |
Rwork | 0.198 |
R-free | 0.22750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5d4t |
RMSD bond length | 0.003 |
RMSD bond angle | 0.797 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.100 | |
High resolution limit [Å] | 2.000 | 12.000 | 2.000 |
Rmerge | 0.098 | 0.022 | 0.782 |
Rmeas | 0.113 | 0.026 | 0.912 |
Total number of observations | 280088 | ||
Number of reflections | 71397 | 356 | 9655 |
<I/σ(I)> | 12.66 | 46.69 | 2.26 |
Completeness [%] | 99.6 | 96.7 | 99.2 |
Redundancy | 2.7 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 281 | 2% (w/v) PEG8000, 0.5 M lithium sulfate |