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5D3P

First bromodomain of BRD4 bound to inhibitor XD41

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2013-01-14
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths38.700, 44.550, 78.620
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.700 - 1.950
R-factor0.17948
Rwork0.178
R-free0.19681
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.352
Data reduction softwareiMOSFLM
Data scaling softwareAimless (0.3.11)
Phasing softwarePHASER (2.5.6)
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.7002.000
High resolution limit [Å]1.9501.950
Rmerge0.1090.351
Number of reflections10251
<I/σ(I)>6.92.8
Completeness [%]98.596.6
Redundancy3.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293PEG3350, Bis-Tris, lithium sulfate

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PDB entries from 2024-11-06

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