5D2M
Complex between human SUMO2-RANGAP1, UBC9 and ZNF451
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-05-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.075 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.240, 115.060, 130.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.349 - 2.400 |
R-factor | 0.196 |
Rwork | 0.195 |
R-free | 0.23440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3uio |
RMSD bond length | 0.003 |
RMSD bond angle | 0.743 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.350 | 2.486 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.120 | 0.514 |
Number of reflections | 46766 | |
<I/σ(I)> | 10.94 | 3.83 |
Completeness [%] | 99.6 | 96.6 |
Redundancy | 7.3 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 6 % (w/v) PEG 8000, 0.2 M ammonium citrate and 0.1 M HEPES pH 7.5 |