5CTU
Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-05-27 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9763 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 142.660, 55.650, 51.140 |
Unit cell angles | 90.00, 101.01, 90.00 |
Refinement procedure
Resolution | 25.860 - 1.450 |
R-factor | 0.1776 |
Rwork | 0.176 |
R-free | 0.20370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kzn |
RMSD bond length | 0.021 |
RMSD bond angle | 2.285 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.9) |
Phasing software | MOLREP (10.2.23) |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.858 | 26.443 | 1.530 |
High resolution limit [Å] | 1.450 | 4.590 | 1.450 |
Rmerge | 0.091 | 0.480 | |
Rmeas | 0.169 | ||
Rpim | 0.091 | 0.060 | 0.305 |
Total number of observations | 231398 | 7097 | 33531 |
Number of reflections | 69300 | ||
<I/σ(I)> | 5.5 | 8.7 | 2.2 |
Completeness [%] | 99.3 | 94 | 99 |
Redundancy | 3.3 | 3.3 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 296 | 40-43% MPD_P1K_P3350, 100 mM Mops/Na-Hepes, 100 mM Divalents |