5CMD
Oligomer crystal structure of CC chemokine 5 (CCL5)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9788 |
Spacegroup name | P 62 |
Unit cell lengths | 124.720, 124.720, 127.050 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.824 - 3.086 |
R-factor | 0.2173 |
Rwork | 0.213 |
R-free | 0.25770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5coy |
RMSD bond length | 0.004 |
RMSD bond angle | 0.851 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.110 |
High resolution limit [Å] | 3.050 | 3.050 |
Rmerge | 0.146 | 0.969 |
Number of reflections | 20688 | |
<I/σ(I)> | 29 | 3.28 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 7.4 | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 303.15 | 0.1 M Tris, 1.8 M Ammonium sulfate |