5CBL
Crystal structure of the C-terminal domain of human galectin-4 with lactose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.512, 126.741, 45.530 |
Unit cell angles | 90.00, 99.65, 90.00 |
Refinement procedure
Resolution | 63.370 - 1.781 |
R-factor | 0.1854 |
Rwork | 0.182 |
R-free | 0.22360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ojb |
RMSD bond length | 0.004 |
RMSD bond angle | 0.979 |
Data reduction software | MOSFLM (7.1.3) |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX (1.9-1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 63.370 | 63.370 | 1.880 |
High resolution limit [Å] | 1.781 | 5.630 | 1.780 |
Rmerge | 0.051 | 0.506 | |
Rmeas | 0.111 | ||
Rpim | 0.044 | 0.021 | 0.226 |
Total number of observations | 274222 | 9352 | 40346 |
Number of reflections | 46238 | ||
<I/σ(I)> | 9.1 | 17.5 | 3.2 |
Completeness [%] | 95.4 | 97 | 97.4 |
Redundancy | 5.9 | 6.2 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 294 | 0.1 M Tris-HCl pH 8.5, 25% a 35% PEG 4000-10000, 0.2 to 0.4 M lithium or ammonium sulfate |