Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5C7Q

Crystal Structure of the Bdellovibrio bacteriovorus Nucleoside Diphosphate Sugar Hydrolase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4C
Synchrotron siteNSLS
BeamlineX4C
Temperature [K]100
Detector technologyCCD
Collection date2010-05-22
DetectorMAR CCD 165 mm
Wavelength(s).948
Spacegroup nameP 21 21 2
Unit cell lengths75.425, 103.098, 51.712
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.520
R-factor0.1877
Rwork0.186
R-free0.21530
Structure solution methodMIR
RMSD bond length0.013
RMSD bond angle1.641
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.570
High resolution limit [Å]1.5203.2701.520
Rmerge0.1110.0690.636
Total number of observations362440
Number of reflections58801
<I/σ(I)>6.6
Completeness [%]94.598.580.9
Redundancy6.263.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72931.75-2.0 M ammonium sulfate, 0.1 M HEPES pH 7.0, and 0-0.5% PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon