5C24
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 7-((4-((4-cyanophenyl)amino)-1,3,5-triazin-2-yl)amino)-6,8-dimethylindolizine-2-carbonitrile (JLJ605), a non-nucleoside inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2014-08-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.075 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 162.287, 72.963, 109.183 |
Unit cell angles | 90.00, 100.17, 90.00 |
Refinement procedure
Resolution | 43.011 - 2.600 |
R-factor | 0.2233 |
Rwork | 0.221 |
R-free | 0.25800 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.723 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (Phenix) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.011 | 50.000 | 2.640 |
High resolution limit [Å] | 2.600 | 7.050 | 2.600 |
Rmerge | 0.055 | 0.625 | |
Rmeas | 0.092 | 0.064 | 0.730 |
Rpim | 0.047 | 0.034 | 0.375 |
Total number of observations | 146748 | ||
Number of reflections | 39121 | ||
<I/σ(I)> | 11.3 | 2.571 | |
Completeness [%] | 99.5 | 98.1 | 99.1 |
Redundancy | 3.8 | 3.6 | 3.7 |
CC(1/2) | 0.993 | 0.766 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277 | 20% v/v PEG 8000, 50 mM HEPES (pH 7.0),100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine-HCl using hanging drop vaporization |