5C0E
HLA-A02 carrying YLGGPDFPTI
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-01-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 56.070, 79.740, 57.000 |
Unit cell angles | 90.00, 115.74, 90.00 |
Refinement procedure
Resolution | 31.290 - 1.491 |
R-factor | 0.157 |
Rwork | 0.156 |
R-free | 0.17860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3utq |
RMSD bond length | 0.021 |
RMSD bond angle | 2.359 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.15) |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.294 | 31.294 | 1.530 |
High resolution limit [Å] | 1.490 | 6.670 | 1.490 |
Rmerge | 0.032 | 1.074 | |
Rmeas | 0.113 | ||
Rpim | 0.055 | 0.025 | 0.617 |
Total number of observations | 285952 | 2977 | 21112 |
Number of reflections | 72820 | ||
<I/σ(I)> | 12.2 | 30.6 | 2.3 |
Completeness [%] | 99.0 | 94.8 | 98.4 |
Redundancy | 3.9 | 3.6 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1M TRIS pH8, 25% PEG 4000, 15% glycerol |