5BZG
Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-29 |
Detector | NOIR-1 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 30.987, 81.744, 32.236 |
Unit cell angles | 90.00, 118.20, 90.00 |
Refinement procedure
Resolution | 9.640 - 2.190 |
R-factor | 0.1935 |
Rwork | 0.191 |
R-free | 0.24160 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.321 |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 9.640 | 2.210 | |
High resolution limit [Å] | 2.160 | 9.640 | 2.160 |
Rmerge | 0.116 | 0.025 | 0.401 |
Rmeas | 0.135 | 0.029 | 0.481 |
Total number of observations | 27713 | ||
Number of reflections | 7318 | 90 | 328 |
<I/σ(I)> | 11.8 | 35.74 | 2.76 |
Completeness [%] | 94.8 | 93.8 | 57 |
Redundancy | 3.787 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | PEG MME 5000, MES, (NH4)2SO4 |