5BZC
Crystal structure of the murine CD44 hyaluronan binding domain complex with a small molecule
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-16 |
Detector | NOIR-1 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 30.970, 81.940, 32.060 |
Unit cell angles | 90.00, 117.91, 90.00 |
Refinement procedure
Resolution | 40.970 - 1.950 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.23170 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.466 |
Data scaling software | XSCALE |
Phasing software | PHASER (2.1.4) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.970 | 1.990 | |
High resolution limit [Å] | 1.940 | 8.680 | 1.940 |
Rmerge | 0.098 | 0.024 | 0.382 |
Rmeas | 0.114 | 0.029 | 0.448 |
Total number of observations | 39128 | ||
Number of reflections | 10233 | 122 | 673 |
<I/σ(I)> | 14.37 | 41.97 | 3.43 |
Completeness [%] | 97.0 | 96.1 | 88.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | PEG MME 5000, MES, (NH4)2SO4 |