5BRZ
MAGE-A3 reactive TCR in complex with MAGE-A3 in HLA-A1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-01-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97950 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 173.590, 47.500, 119.250 |
Unit cell angles | 90.00, 109.12, 90.00 |
Refinement procedure
Resolution | 82.010 - 2.620 |
R-factor | 0.1971 |
Rwork | 0.193 |
R-free | 0.26830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1W72 and 3O4L |
RMSD bond length | 0.012 |
RMSD bond angle | 1.597 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER (2.5.1) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 82.010 | 82.010 | 2.690 |
High resolution limit [Å] | 2.620 | 11.720 | 2.620 |
Rmerge | 0.107 | 0.020 | 0.915 |
Rpim | 0.064 | 0.013 | 0.588 |
Total number of observations | 99682 | 1113 | 7447 |
Number of reflections | 27833 | ||
<I/σ(I)> | 12.4 | 39.7 | 1.9 |
Completeness [%] | 98.9 | 93 | 99.7 |
Redundancy | 3.6 | 3.3 | 3.7 |
CC(1/2) | 0.995 | 0.999 | 0.450 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2M ammonium chloride, 0.1M HEPES pH7, 15% PEG 8000 |