5BOO
Crystal structure of Plasmodium falciparum dihydroorotate dehydrogenase bound with Inhibitor DSM265
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-23 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 65 |
Unit cell lengths | 89.257, 89.257, 275.610 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.100 - 2.800 |
R-factor | 0.235 |
Rwork | 0.234 |
R-free | 0.25360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rx0 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.059 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.100 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.067 | 1.000 |
Number of reflections | 30850 | |
<I/σ(I)> | 26.3 | 1.1 |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.5 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 293 | 16 M ammonium sulfate, 0.1 M Sodium Acetate, pH 4.8, 20% (w/v) PEG4000, 24% (v/v) glycerol, and 10 mM DTT |