5BJO
Crystal structure of the Corn RNA aptamer in complex with DFHO, site-specific 5-iodo-U
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-03-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.5498 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.269, 55.305, 99.002 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.500 - 2.350 |
R-factor | 0.18448 |
Rwork | 0.180 |
R-free | 0.22822 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.905 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 2.350 |
Number of reflections | 7797 |
<I/σ(I)> | 32.1 |
Completeness [%] | 99.1 |
Redundancy | 11.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 30% PEG 550 MME, 0.1 M Tris-HCl pH 8.05 |