5ARG
SMYD2 in complex with SGC probe BAY-598
Experimental procedure
| Experimental method | SINGLE WAVELENGTH | 
| Source type | SYNCHROTRON | 
| Source details | BESSY BEAMLINE 14.1 | 
| Synchrotron site | BESSY | 
| Beamline | 14.1 | 
| Temperature [K] | 100 | 
| Detector technology | PIXEL | 
| Collection date | 2015-01-21 | 
| Detector | DECTRIS PILATUS 6M | 
| Spacegroup name | P 21 21 21 | 
| Unit cell lengths | 52.343, 69.600, 131.115 | 
| Unit cell angles | 90.00, 90.00, 90.00 | 
Refinement procedure
| Resolution | 47.720 - 1.990 | 
| R-factor | 0.2322 | 
| Rwork | 0.230 | 
| R-free | 0.27318 | 
| Structure solution method | MOLECULAR REPLACEMENT | 
| Starting model (for MR) | 3tg5 | 
| RMSD bond length | 0.017 | 
| RMSD bond angle | 2.033 | 
| Data reduction software | XDS | 
| Data scaling software | XSCALE | 
| Phasing software | PHASER | 
| Refinement software | REFMAC (5.8.0049) | 
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.610 | 2.110 | 
| High resolution limit [Å] | 1.990 | 1.990 | 
| Rmerge | 0.100 | 0.820 | 
| Number of reflections | 33656 | |
| <I/σ(I)> | 14.39 | 2.41 | 
| Completeness [%] | 99.9 | 99.5 | 
| Redundancy | 6.58 | 
Crystallization Conditions
| crystal ID | method | pH | temperature | details | 
| 1 | 7 | 277 | 22% PEG 3350, 100 MMOL HEPES PH 7.0. CRYO BUFFER CONTAINS AN ADDTIONAL 20% GLYCEROL AND 1 MMOL LIGAND. OTHER CRYSTALISATION REMARKS:4 MILLIMOLAR COFACTOR SAM ADDED AND MIXTURE INCUBATED FOR 2 HOURS AT 4 DEGREE CELSIUS PRIOR TO CRYSTALLIZATION. CO- COMPLEX WITH BAY-598 FORMED BY SOAKING SMYD2-SAM CRYSTALS WITH 5 MILLIMOLAR LIGAND FOR 4 DAYS. | 






