Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5AOL

Structure of the p53 cancer mutant Y220C with bound 3-bromo-5-(trifluoromethyl)benzene-1,2-diamine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
DetectorDECTRIS PILATUS
Spacegroup nameP 21 21 21
Unit cell lengths64.910, 71.240, 105.020
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.421 - 1.500
R-factor0.14
Rwork0.139
R-free0.16940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2j1x
RMSD bond length0.006
RMSD bond angle1.023
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.4001.580
High resolution limit [Å]1.5001.500
Rmerge0.0700.340
Number of reflections78962
<I/σ(I)>144.1
Completeness [%]99.899.6
Redundancy5.65.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP294SITTING-DROP VAPOR DIFFUSION AT 21 DEGREE C. PROTEIN SOLUTION: 6 MG/ML PROTEIN IN 25 MM SODIUM PHOSPHATE, PH 7.2, 150 MM KCL, 5 MM DTT. RESERVOIR BUFFER: 100 MM HEPES, PH 7.2, 19% (W/V) POLYETHYLENE GLYCOL 4000, 5 MM DTT. SOAKING BUFFER: 30 MM COMPOUND IN 100 MM HEPES, PH 7.2, 10 MM SODIUM PHOSPHATE, PH 7.2, 19% (W/V) POLYETHYLENE GLYCOL 4000, 20 % (V/V) GLYCEROL, 150 MM KCL.

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon