5A7O
Crystal structure of human JMJD2A in complex with compound 42
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-03-07 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 100.910, 149.130, 57.090 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.317 - 2.150 |
Rwork | 0.182 |
R-free | 0.22190 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oq7 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.320 | 2.210 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.050 | 0.630 |
Number of reflections | 47555 | |
<I/σ(I)> | 21.9 | 2.9 |
Completeness [%] | 99.7 | 99.4 |
Redundancy | 6.6 | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8.5 | PEG3350 -- 0.1M TRIS PH 8.5 -- 0.25M AMMONIUM SULFATE |