5A3N
Crystal structure of human PLU-1 (JARID1B) in complex with KDOAM25a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-06 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 141.874, 141.874, 151.865 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 122.870 - 2.000 |
R-factor | 0.18382 |
Rwork | 0.183 |
R-free | 0.20335 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 51AF |
RMSD bond length | 0.009 |
RMSD bond angle | 1.358 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | CCP4-AUTOMR |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.810 | 2.110 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.080 | 0.640 |
Number of reflections | 60715 | |
<I/σ(I)> | 21.7 | 3.5 |
Completeness [%] | 99.3 | 95.8 |
Redundancy | 12.6 | 8.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8 | 0.1M HEPES PH 8.0, 0.8M POTASSIUM PHOSPHATE-DIBASIC, 0.8M SODIUM PHOSPHATE MONOBASIC |