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5A2J

Crystal structure of scFv-SM3 in complex with the naked peptide APDTRP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyCCD
DetectorADSC CCD
Spacegroup nameP 1 21 1
Unit cell lengths45.853, 35.486, 69.518
Unit cell angles90.00, 98.99, 90.00
Refinement procedure
Resolution68.660 - 1.650
R-factor0.16737
Rwork0.166
R-free0.19733
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1sm3
RMSD bond length0.010
RMSD bond angle1.493
Data reduction softwareXDS
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.740
High resolution limit [Å]1.6501.650
Rmerge0.0600.280
Number of reflections26087
<I/σ(I)>13.64
Completeness [%]97.195.8
Redundancy3.83.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1

237735

PDB entries from 2025-06-18

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