5ZL6
Histidine Racemase from Leuconostoc mesenteroides subsp. sake NBRC 102480
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-22 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.048, 142.468, 78.701 |
Unit cell angles | 90.00, 99.30, 90.00 |
Refinement procedure
Resolution | 33.600 - 2.100 |
R-factor | 0.177 |
Rwork | 0.174 |
R-free | 0.23500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3co8 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.033 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | BALBES |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.600 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.129 | 0.353 |
Number of reflections | 84173 | 8174 |
<I/σ(I)> | 8.7 | 2.9 |
Completeness [%] | 98.2 | 95.8 |
Redundancy | 3.1 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 10% (w/v) polyethylene glycol 4000, 5% (w/v) glycerol, 200 mM magnesium chloride and a 100 mM Tris-HCl buffer (pH 7.0) |