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5YY9

Crystal structure of Tandem Tudor Domain of human UHRF1 in complex with LIG1-K126me3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2017-05-01
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths27.105, 97.349, 132.529
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.228 - 2.653
R-factor0.2367
Rwork0.231
R-free0.28770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3db3
RMSD bond length0.004
RMSD bond angle0.812
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6702.780
High resolution limit [Å]2.6502.650
Rmerge0.1200.700
Number of reflections40019
<I/σ(I)>8.52.4
Completeness [%]97.095.4
Redundancy3.83.8
CC(1/2)0.9900.950
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729300 mM Tris-HCl (pH 7.0), 200 mM tri-potassium phosphate and 20% (w/v) PEG 3350

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