Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YGY

Crystal Structure of BACE1 in complex with (S)-N-(3-(2-amino-6-(fluoromethyl)-4 -methyl-4H-1,3-oxazin-4-yl)-4-fluorophenyl)-5-cyanopicolinamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-08-06
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 61 2 2
Unit cell lengths102.149, 102.149, 171.125
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000 - 2.300
R-factor0.1957
Rwork0.191
R-free0.23540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1w50
RMSD bond length0.010
RMSD bond angle1.494
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.340
High resolution limit [Å]2.3006.2402.300
Rmerge0.1000.0440.529
Number of reflections2404513091180
<I/σ(I)>8.8
Completeness [%]99.394.299.7
Redundancy5.44.85.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2M sodium citrate tribasic pH6.5, 0.2M ammonium iodide, 20.5%(w/v) PEG5000MME

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon