5YCN

Human PPARgamma ligand binding domain complexed with Lobeglitazone

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	PAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron site	PAL/PLS
Beamline	7A (6B, 6C1)
Temperature [K]	100
Detector technology	CCD
Collection date	2015-03-31
Detector	ADSC QUANTUM 270
Wavelength(s)	0.97935
Spacegroup name	P 21 21 2
Unit cell lengths	130.959, 53.168, 54.856
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	30.000 - 2.150
R-factor	0.20879
Rwork	0.208
R-free	0.22832
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	5gto
RMSD bond length	0.010
RMSD bond angle	1.494
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	MOLREP
Refinement software	REFMAC (5.8.0103)

Data quality characteristics

	Overall
Low resolution limit [Å]	50.000
High resolution limit [Å]	2.150
<I/σ(I)>	31
Completeness [%]	99.8
Redundancy	4.5

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	6.5	296	1.6 M sodium citrate tribasic dihydrate (pH 6.5)