5XOW
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 6'A7' on the target strand
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2015-05-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 200.824, 200.824, 200.824 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.707 - 2.902 |
R-factor | 0.2164 |
Rwork | 0.214 |
R-free | 0.25660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kpy |
RMSD bond length | 0.008 |
RMSD bond angle | 1.476 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.950 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.528 | |
Number of reflections | 30962 | 1504 |
<I/σ(I)> | 15.8 | 2.1 |
Completeness [%] | 99.3 | 99 |
Redundancy | 8.8 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 308 | 2.0 M Na-formate and 0.1 M Tris-HCl pH 7.2-7.5 |