Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XHK

Crystal structure of the BRD2-BD2 in complex with phenanthridinone

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2016-02-15
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97
Spacegroup nameP 2 21 21
Unit cell lengths32.040, 52.510, 71.370
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.280
R-factor0.1587
Rwork0.157
R-free0.19190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ig6
RMSD bond length0.006
RMSD bond angle1.179
Data reduction softwareiMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.2961.350
High resolution limit [Å]1.2801.280
Rmerge0.0540.291
Rmeas0.0630.351
Rpim0.0320.192
Number of reflections25998
<I/σ(I)>11.72.5
Completeness [%]83.288
Redundancy3.33
CC(1/2)0.9980.890
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529325% PEG MME 2000, 10% Glycerol, Tris-Cl

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon