5XHE
Crystal structure analysis of the second bromodomain of BRD2 covalently linked to b-mercaptoethanol
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
| Synchrotron site | RRCAT INDUS-2 |
| Beamline | PX-BL21 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-07-08 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.90 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 32.190, 52.450, 71.870 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 20.000 - 1.400 |
| R-factor | 0.14501 |
| Rwork | 0.144 |
| R-free | 0.17155 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.268 |
| Data reduction software | iMOSFLM |
| Data scaling software | SCALA (3.3.22) |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 42.367 | 1.480 |
| High resolution limit [Å] | 1.400 | 1.400 |
| Rmerge | 0.079 | 0.583 |
| Rmeas | 0.086 | 0.639 |
| Rpim | 0.035 | 0.256 |
| Number of reflections | 24042 | |
| <I/σ(I)> | 12.9 | 2.9 |
| Completeness [%] | 98.3 | 97 |
| Redundancy | 6 | 6 |
| CC(1/2) | 0.998 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 22% PEG 2000, 5mM b-ME, 10% Glycerol, 50mM Tris-Cl |






