5XGP
structure of Sizzled from Xenopus laevis at 2.08 angstroms resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97915 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 70.131, 70.131, 132.584 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.855 - 2.077 |
R-factor | 0.2143 |
Rwork | 0.213 |
R-free | 0.23000 |
Structure solution method | SAD |
RMSD bond length | 0.002 |
RMSD bond angle | 0.457 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.120 |
High resolution limit [Å] | 2.080 | 2.080 |
Rmerge | 0.071 | 0.956 |
Rpim | 0.032 | 0.423 |
Number of reflections | 20594 | 1014 |
<I/σ(I)> | 30.1 | 3.1 |
Completeness [%] | 99.3 | 99.8 |
Redundancy | 6 | 6.1 |
CC(1/2) | 0.824 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 10% PEG8K, 0.1 M imidazole (pH 8.0) and 0.2 M lithium sulfate. |