5XE1
Crystal structure of the indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with INCB14943
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.050, 97.380, 128.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 3.200 |
R-factor | 0.23015 |
Rwork | 0.228 |
R-free | 0.27432 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ek3 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.465 |
Data scaling software | Aimless (0.5.17) |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 97.380 | 97.380 | 3.420 |
High resolution limit [Å] | 3.200 | 9.050 | 3.200 |
Rmerge | 0.145 | 0.057 | 0.890 |
Rmeas | 0.157 | 0.061 | 0.973 |
Rpim | 0.057 | 0.022 | 0.379 |
Total number of observations | 122125 | 5836 | 19361 |
Number of reflections | 18282 | ||
<I/σ(I)> | 8.7 | 20.7 | 2 |
Completeness [%] | 98.4 | 98.2 | 97.6 |
Redundancy | 6.7 | 6.4 | 6 |
CC(1/2) | 0.991 | 0.997 | 0.712 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 9.5 | 293 | 10% (w/v) PEG-8000, 0.1M CHES pH 9.5, 0.2M NaCl |