5X69
Human thymidylate synthase with a fragment bound in the dimer interface
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.999999 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 109.353, 109.353, 315.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.175 - 2.690 |
R-factor | 0.211 |
Rwork | 0.209 |
R-free | 0.24550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i00 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.639 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.800 |
High resolution limit [Å] | 2.690 | 5.800 | 2.700 |
Rmerge | 0.114 | 0.067 | 0.429 |
Rmeas | 0.120 | 0.069 | 0.465 |
Rpim | 0.036 | 0.019 | 0.172 |
Total number of observations | 569527 | ||
Number of reflections | 53294 | ||
<I/σ(I)> | 7.1 | ||
Completeness [%] | 98.4 | 98.7 | 91.1 |
Redundancy | 10.7 | 13.8 | 6.9 |
CC(1/2) | 0.999 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 100mM sodium calcodylate, pH 6.5, 25% PEG 4000 |