5X50
RNA Polymerase II from Komagataella Pastoris (Type-2 crystal)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL41XU |
| Synchrotron site | SPring-8 |
| Beamline | BL41XU |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-10-28 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 31 |
| Unit cell lengths | 211.750, 211.750, 132.280 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 40.704 - 4.293 |
| R-factor | 0.238 |
| Rwork | 0.235 |
| R-free | 0.29570 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2vum |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.696 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 40.704 | 40.704 | 4.550 |
| High resolution limit [Å] | 4.290 | 12.500 | 4.290 |
| Rmerge | 0.188 | 0.057 | 1.479 |
| Rmeas | 0.211 | 0.064 | 1.662 |
| Total number of observations | 219141 | ||
| Number of reflections | 45119 | 1779 | 7130 |
| <I/σ(I)> | 5.97 | 23.31 | 0.98 |
| Completeness [%] | 99.6 | 97.6 | 97.9 |
| Redundancy | 4.857 | 4.395 | 4.766 |
| CC(1/2) | 0.994 | 0.994 | 0.457 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 287 | 0.2 M sodium citrate, 8% PGA-LM and 1 % dextran sulfate sodium salt |






