5WLY
E. coli LpxH- 8 mutations
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-22 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 57.012, 62.064, 66.047 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.230 - 2.000 |
R-factor | 0.1998 |
Rwork | 0.198 |
R-free | 0.22710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5b4a |
Data reduction software | XDS (vOct 15, 2015) |
Data scaling software | Aimless (v0.5.21) |
Phasing software | PHENIX (v1.11.1_2575) |
Refinement software | PHENIX (v1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.050 | 2.060 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.179 | 1.973 |
Rpim | 0.078 | 0.867 |
Number of reflections | 16046 | 1090 |
<I/σ(I)> | 7.7 | 0.8 |
Completeness [%] | 98.6 | 91 |
Redundancy | 6 | 5.9 |
CC(1/2) | 0.994 | 0.279 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.2 | 292 | 7.1 g/L protein in 0.25 M NaCl, 10 mM Tris-HCl pH 7.4, 2.5 mM DTT, 1.25 mM MnCl2, and 20 mM reduced glutathione was combined 2:1 (protein to well solution) with 0.1 M Tris-HCl pH 8.2, 80 mM magnesium formate, and 5% 2-propanol |