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5WKM

2.25 A resolution structure of MERS 3CL protease in complex with piperidine-based peptidomimetic inhibitor 21

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2016-06-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00000
Spacegroup nameC 1 2 1
Unit cell lengths100.626, 58.114, 49.862
Unit cell angles90.00, 112.07, 90.00
Refinement procedure
Resolution46.626 - 2.250
R-factor0.1646
Rwork0.161
R-free0.22820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rsp
RMSD bond length0.012
RMSD bond angle1.193
Data reduction softwareXDS
Data scaling softwareAimless (0.5.25)
Phasing softwarePHASER
Refinement softwarePHENIX ((dev_2838))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.63046.6302.320
High resolution limit [Å]2.2509.0002.250
Rmerge0.0870.0200.624
Total number of observations42870
Number of reflections12726
<I/σ(I)>12.2
Completeness [%]99.798.599.8
Redundancy3.43.23.3
CC(1/2)0.9970.9990.776
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529325% (w/v) PEG 3350, 100 mM Bis-Tris, 200 mM MgCl2

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