5WKJ
2.05 A resolution structure of MERS 3CL protease in complex with inhibitor GC376
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-16 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 101.807, 58.292, 49.785 |
Unit cell angles | 90.00, 112.25, 90.00 |
Refinement procedure
Resolution | 41.787 - 2.050 |
R-factor | 0.1638 |
Rwork | 0.160 |
R-free | 0.23370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rsp |
RMSD bond length | 0.009 |
RMSD bond angle | 1.011 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.12) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX ((dev_2838)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.570 | 49.570 | 2.110 |
High resolution limit [Å] | 2.050 | 8.940 | 2.050 |
Rmerge | 0.099 | 0.023 | 0.759 |
Total number of observations | 56558 | 677 | 4472 |
Number of reflections | 16912 | 216 | 1321 |
<I/σ(I)> | 9.3 | 32 | 1.8 |
Completeness [%] | 99.2 | 93.7 | 99.6 |
Redundancy | 3.3 | 3.1 | 3.4 |
CC(1/2) | 0.996 | 0.999 | 0.673 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 30% (v/v) PEG 550 MME, 100 mM Bis-Tris, 50 mM CaCl2 |