5WB8
Crystal structure of the epidermal growth factor receptor extracellular region in complex with epigen
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-09 |
Detector | MARRESEARCH |
Wavelength(s) | 1.03 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 104.050, 104.050, 285.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.889 - 3.000 |
R-factor | 0.2683 |
Rwork | 0.265 |
R-free | 0.31160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | EGFR domains I and III from PDB entry 3NJP |
RMSD bond length | 0.002 |
RMSD bond angle | 0.654 |
Data reduction software | HKL-3000 |
Data scaling software | PHENIX |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.040 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.280 | 0.655 |
Rpim | 0.141 | 0.290 |
Number of reflections | 31787 | 3148 |
<I/σ(I)> | 6.7 | 2.3 |
Completeness [%] | 97.2 | 98.75 |
Redundancy | 5.3 | 5.8 |
CC(1/2) | 0.604 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 294 | 0.1 magnesium formate, 15% PEG3350 |