5W0N
Structure of human TUT7 catalytic module (CM) in complex with UMPNPP and U2 RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 61 |
Unit cell lengths | 135.972, 135.972, 181.574 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 58.878 - 2.497 |
R-factor | 0.1881 |
Rwork | 0.187 |
R-free | 0.21510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w0b |
RMSD bond length | 0.005 |
RMSD bond angle | 0.585 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 98.798 | 2.510 |
High resolution limit [Å] | 2.497 | 2.497 |
Rmerge | 0.063 | |
Number of reflections | 65579 | |
<I/σ(I)> | 15.5 | |
Completeness [%] | 99.6 | |
Redundancy | 4.4 | |
CC(1/2) | 0.998 | 0.872 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.8-1.0 M lithium sulfate, 0.075-0.2 M potassium iodide, 0.05-0.2 M trisodium citrate, pH 5-6 |